Project: Cytoprophet. A Cytoscape plug-in to infer molecular interactions based on experimental data available in biological online databases. Description at Cytoscape site.

Project: 3D Network Viewer. A java interactive tool for visualization of networks in 3D space. Used to represent Fibrin networks observed in experiments and any other biological or social networks in 3D space. Output can be used in 3D Hardware with appropriate 3D glasses.

Project: DCA software/Server. An implementation of the DCA algorithm is available at http://dca.rice.edu. A public web service of to compute direct coupling in sequence data is coming soon.